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Honey bees provide a snapshot of city landscape and health

A recent study published in Environmental Microbiome suggests that urban honey bees could be used as a tool to gather information on the microbiome of the cities in which they forage. The research team, led by Elizabeth Hénaff, investigated the potential of honey bees to help gather samples of microorganisms across cities, as honey bees are known to forage daily up to one mile from their hives in urban environments.


Understanding the Microbial Landscape of Cities


Cities are spaces that host a wide range of living species, and understanding this diverse landscape is important for urban planning and human health. However, sampling the microbial landscape in a manner that covers wide areas of a city can be labor-intensive. This is where honey bees come in.


Sampling Honey Bee Hives


As part of a pilot study, the research team sampled various materials from three hives in New York and found diverse genetic information, including from environmental bacteria, in the debris accumulated at the bottom of the hives. Subsequent samples of hive debris in Sydney and Melbourne (Australia), Venice (Italy), and Tokyo (Japan) suggest that each location has a unique genetic signature as seen by honey bees.


Unique Genetic Signatures in Different Cities



In Venice, the genetic data was dominated by fungi related to wood rot and date palm DNA. In Melbourne, the sample was dominated by eucalyptus DNA, while the sample from Sydney showed little plant DNA but contained genetic data from a bacteria species that degrades rubber (Gordonia polyisoprenivorans). Tokyo samples included plant DNA from Lotus and wild soybean, as well as the soy sauce fermenting yeast Zygosaccharomyces rouxii.


Potential for Surveillance


Additionally, the authors compiled genetic material from the hive debris for Rickettsia felis ("cat scratch fever"), a pathogen that is spread to humans via cat scratches. These findings indicate the potential of this as a surveillance method but are currently too preliminary to suggest that this is an effective method of monitoring human diseases.


Assessing the Health of Honey Bee Hives


The hive debris also contained bee-related microorganisms, likely coming from honey bee parts present in the debris. Based on 33 samples from the hives across the subsequent four cities, the authors found known bee microorganisms, whose presence indicate a healthy hive, and in some hives bee pathogens were detected, such as Paenibacillus larvae, Melissococcus plutonius, or the parasite Varroa destructor. The authors suggest these findings indicate that debris may additionally be used to assess the overall health of the hives.


Journal Information: Elizabeth Hénaff, Holobiont Urbanism: sampling urban beehives reveals cities' metagenomes, Environmental Microbiome (2023). DOI: 10.1186/s40793-023-00467-z. www.biomedcentral.com/articles … 6/s40793-023-00467-z
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